Searched refs:activeSegment (Results 1 – 2 of 2) sorted by relevance
168 COVER_segment_t activeSegment; in FASTCOVER_selectSegment() local172 activeSegment.begin = begin; in FASTCOVER_selectSegment()173 activeSegment.end = begin; in FASTCOVER_selectSegment()174 activeSegment.score = 0; in FASTCOVER_selectSegment()179 while (activeSegment.end < end) { in FASTCOVER_selectSegment()181 const size_t idx = FASTCOVER_hashPtrToIndex(ctx->samples + activeSegment.end, f, d); in FASTCOVER_selectSegment()185 activeSegment.score += freqs[idx]; in FASTCOVER_selectSegment()188 activeSegment.end += 1; in FASTCOVER_selectSegment()191 if (activeSegment.end - activeSegment.begin == dmersInK + 1) { in FASTCOVER_selectSegment()193 const size_t delIndex = FASTCOVER_hashPtrToIndex(ctx->samples + activeSegment.begin, f, d); in FASTCOVER_selectSegment()[all …]
476 COVER_segment_t activeSegment; local480 activeSegment.begin = begin;481 activeSegment.end = begin;482 activeSegment.score = 0;486 while (activeSegment.end < end) {488 U32 newDmer = ctx->dmerAt[activeSegment.end];496 activeSegment.score += freqs[newDmer];499 activeSegment.end += 1;503 if (activeSegment.end - activeSegment.begin == dmersInK + 1) {504 U32 delDmer = ctx->dmerAt[activeSegment.begin];[all …]