Searched refs:activeSegment (Results 1 – 2 of 2) sorted by relevance
168 COVER_segment_t activeSegment; in FASTCOVER_selectSegment() local172 activeSegment.begin = begin; in FASTCOVER_selectSegment()173 activeSegment.end = begin; in FASTCOVER_selectSegment()174 activeSegment.score = 0; in FASTCOVER_selectSegment()179 while (activeSegment.end < end) { in FASTCOVER_selectSegment()181 const size_t idx = FASTCOVER_hashPtrToIndex(ctx->samples + activeSegment.end, f, d); in FASTCOVER_selectSegment()185 activeSegment.score += freqs[idx]; in FASTCOVER_selectSegment()188 activeSegment.end += 1; in FASTCOVER_selectSegment()191 if (activeSegment.end - activeSegment.begin == dmersInK + 1) { in FASTCOVER_selectSegment()193 const size_t delIndex = FASTCOVER_hashPtrToIndex(ctx->samples + activeSegment.begin, f, d); in FASTCOVER_selectSegment()[all …]
423 COVER_segment_t activeSegment; in COVER_selectSegment() local427 activeSegment.begin = begin; in COVER_selectSegment()428 activeSegment.end = begin; in COVER_selectSegment()429 activeSegment.score = 0; in COVER_selectSegment()433 while (activeSegment.end < end) { in COVER_selectSegment()435 U32 newDmer = ctx->dmerAt[activeSegment.end]; in COVER_selectSegment()443 activeSegment.score += freqs[newDmer]; in COVER_selectSegment()446 activeSegment.end += 1; in COVER_selectSegment()450 if (activeSegment.end - activeSegment.begin == dmersInK + 1) { in COVER_selectSegment()451 U32 delDmer = ctx->dmerAt[activeSegment.begin]; in COVER_selectSegment()[all …]