Lines Matching refs:rules
60 by a relatively flexible (user editable) rules file, whose
103 are specified in the packing rules file.
105 associated with each "base pair" is a set of rules
135 inclusion rules
136 exclusion rules
137 restriction rules (from the command line)
217 data-structures for recording rules
252 by the current rules.
271 rules.c
272 routines to read and write the rules file
273 routines to add rules and enumerate in-core rules
316 rules.c
341 if new rules
418 in some situations, only new rules are interpreted.