Lines Matching refs:regex
45 >>&0x00 regex =^[@]HD\t.*VN: \b, with SAM header
46 >>>&0 regex =[0-9.]+ \b version %s
122 #0 regex =^@[A-Za-z0-9_.:-]+\?\n
124 #>&1 regex =^[A-Za-z\n.~]++
126 #>>&1 regex =^[A-Za-z0-9_.:-]*\?\n
128 #>>>&1 regex =^[!-~\n]+\n FASTQ
135 # q>0 regex =^[>][!-~\t\ ]+$
137 #>>1 regex !=[!-'Jj;:=?@^`|~\\] FASTA
140 #>>>1 regex !=[EFIJLOPQZefijlopqz] \b, with IUPAC nucleotide codes
141 #>>>1 regex =^[EFIJLOPQZefijlopqz]+$ \b, with Amino Acid codes
151 >>&0 regex [0-9.]+ \b version %s
156 0 regex =^[!-?A-~]{1,255}(\t[^\t]+){11}
158 >0 regex =^([^\t]+\t){1}[0-9]{1,5}\t
160 >>0 regex =^([^\t]+\t){2}\\*|[^*=]*\t
162 >>>0 regex =^([^\t]+\t){3}[0-9]{1,9}\t
164 >>>>0 regex =^([^\t]+\t){4}[0-9]{1,3}\t
166 >>>>>0 regex =\t(\\*|([0-9]+[MIDNSHPX=])+)\t
168 >>>>>>0 regex =\t(\\*|=|[!-()+->?-~][!-~]*)\t
170 >>>>>>>0 regex =^([^\t]+\t){7}[0-9]{1,9}\t
172 >>>>>>>>0 regex =\t[+-]{0,1}[0-9]{1,9}\t.*\t
174 >>>>>>>>>0 regex =^([^\t]+\t){9}(\\*|[A-Za-z=.]+)\t
176 >>>>>>>>>>0 regex =^([^\t]+\t){10}[!-~]+ Sequence Alignment/Map (SAM)
177 >>>>>>>>>>>0 regex =^[@]HD\t.*VN: \b, with header
178 >>>>>>>>>>>>&0 regex =[0-9.]+ \b version %s